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Publications

The Pulmonary, Critical Care & Sleep Medicine section of the Department of Medicine participates in several publications on a yearly basis. Click the yearly tabs to view them by year.

2021

  1. Raphael IJ, Pedemonte M. Neurobiology of Sleep.  Sleep Neurology: Springer; 2021. p. 15-30.
  2. Farooqui SM, Ward R, Aziz M. Shwachman-diamond syndrome. StatPearls [Internet]. 2021.
  3. Williams KM, Wilson PT, Silva-Palacios F, Kebbe J, LaBeaud AD, Agudelo H, et al. COVID-19 Cliff Notes: A COVID-19 Multidisciplinary Care Compendium. Transplant Cell Ther. 2021;27(6):474.e1-.e3.
  4. Bodas M, Moore AR, Subramaniyan B, Georgescu C, Wren JD, Freeman WM, et al. Cigarette smoke activates NOTCH3 to promote goblet cell differentiation in human airway epithelial cells. American Journal of Respiratory Cell and Molecular Biology. 2021;64(4):426-40.
  5. Ahel El Haj Chehade IR, Brown B, Abdo T. A “double fistula” with Mycobacterium avium complex lung disease. Respirology case reports. 2021;9(8).
  6. Nihan K, Makda A, Salat H, Khursheed M, Fayyaz J, Khan UR. Assessment of knowledge, attitude, and practice of child abuse amongst health care professionals working in tertiary care hospitals of Karachi, Pakistan. Journal of family medicine and primary care. 2021;10(3):1364.
  7. Shah AT, Bernardo RJ, Berry GJ, Kudelko K, Wakelee HA. Two Cases of Pulmonary Tumor Thrombotic Microangiopathy Associated with ROS1-Rearranged Non-Small-Cell Lung Cancer. Clin Lung Cancer. 2021;22(2):e153-e6.
  8. Piccari L, Bernardo RJ, Rodríguez-Chiaradía D, Vitulo P, Wort SJ, Sahay S. Pulmonary vasodilator treatment in pulmonary hypertension due to left heart or lung disease: time for a high-definition picture? Pulmonary Circulation. 2021;11(2):20458940211018074.
  9. Wu H, Rhoades DA, Chen S, Brown B. Native American Patients with Chronic Obstructive Pulmonary Disease Exacerbations in a Tertiary Academic Medical Center–A Pilot Study. International Journal of Chronic Obstructive Pulmonary Disease. 2021;16:1163.
  10. Wu W, Tian L, Zhang W, Booth JL, Ainsua-Enrich E, Kovats S, et al. Long-term cigarette smoke exposure dysregulates pulmonary T cell response and IFN-γ protection to influenza virus in mouse. Respiratory research. 2021;22(1):1-14.
  11. Wu W, Zhang W, Tian L, Brown BR, Walters MS, Metcalf JP. IRF7 is required for the second phase interferon induction during influenza virus infection in human lung epithelia. Viruses. 2020;12(4):377.
  12. Samuel S, Brown B, Mason N, Abdo T. Grade 4 Liver Laceration after Cardiopulmonary Resuscitation: A Case Report. Asploro Journal of Biomedical and Clinical Case Reports. 2021;4(2):93.
  13. Piccari L, Bernardo RJ, RodrÃguez D, Vitulo P, Wort SJ, Sahay S. EXPRESS: Pulmonary vasodilator treatment in pulmonary hypertension due to left heart or lung disease: time for a high-definition picture? Pulmonary Circulation. 2021:20458940211018074.
  14. Khattab MH, Prodan CI, Vincent AS, Xu C, Jones KR, Thind S, et al. Increased procoagulant platelet levels are predictive of death in COVID-19. Geroscience. 2021:1-11.
  15. Jacobs BA, Christian F, Youness H, Chaudry F. Evaluation and Treatment of a Rare Benign Tracheobronchial Tumor. Annals of the American Thoracic Society. 2021;18(7):1240-2.
  16. Griffeth EM, Whitson B, Huard D, Brown BR. Endobronchial Lipoma: Case Report and Literature Review. The American journal of the medical sciences. 2021;361(1):111-7.
  17. Gaines H, Jones KR, Lim J, Medhi NF, Chen S, Scofield RH. Effect of CFTR modulator therapy on cystic fibrosis-related diabetes. J Diabetes Complications. 2021;35(6):107845.

2020

  1. Chen J-T, Roberts R, Fazzari MJ, et al. Variation in Fluid and Vasopressor Use in Shock With and Without Physiologic Assessment: A Multicenter Observational Study. Critical care medicine. 9000;Online First.
  2. Hoang K, Abdo T, Reinersman JM, Lu R, Higuita NIA. A case of invasive pulmonary mucormycosis resulting from short courses of corticosteroids in a well-controlled diabetic patient. Med Mycol Case Rep. 2020;29:22-24.
  3. Misra S, Das PK, Bal SK, et al. Therapeutic Whole Lung Lavage for Alveolar Proteinosis. Journal of cardiothoracic and vascular anesthesia. 2020;34(1):250-257.
  4. Molina JC, Chaudry F, Menezes V, et al. Transvascular endosonographic-guided needle biopsy of intrathoracic lesions. The Journal of thoracic and cardiovascular surgery. 2020;159(5):2057-2065.
  5. Raad S, Wilkerson M, Jones KR, Orr WC. The effect of baclofen on objective and subjective sleep measures in a model of transient insomnia. Sleep medicine. 2020;72:130-134.
  6. Wu W, Metcalf JP. The Role of Type I IFNs in Influenza: Antiviral Superheroes or Immunopathogenic Villains? Journal of Innate Immunity. 2020.
  7. Wu W, Zhang W, Tian L, Brown BR, Walters MS, Metcalf JP. IRF7 Is Required for the Second Phase Interferon Induction during Influenza Virus Infection in Human Lung Epithelia. Viruses. 2020;12(4):377.
  8. Yamamoto S, Allen K, Jones KR, Cohen SS, Reyes K, Huhmann MB. Meeting Calorie and Protein Needs in the Critical Care Unit: A Prospective Observational Pilot Study. Nutr Metab Insights. 2020;13:1178638820905992.
  9. Bodas M, Moore AR, Subramaniyan B, et al. Cigarette Smoke Activates NOTCH3 to Promote Goblet Cell Differentiation in Human Airway Epithelial Cells. bioRxiv. 2020.
  10. Patel VI, Booth JL, Dozmorov M, Brown BR, Metcalf JP. Anthrax Edema and Lethal Toxins Differentially Target Human Lung and Blood Phagocytes. Toxins. 2020;12(7):464.
  11. Asad ZUA, Przebinda A, Chaudhary AMD, Farooqui S, Youness H, Stavrakis S. The role of vagus nerve stimulation in sepsis. Bioelectronics in Medicine. 2020;3(4):51-62.
  12. Chehade AEH, Debal G, Mansour W, Avula A, Chalhoub M. Pneumopericardium, pneumomediastinum and air travel: A case report in a patient with Gardner syndrome. Respiratory medicine case reports. 2020;31:101271.
  13. Bader N, Ul-Haq A. Name the Syndrome: Cytokine Release Syndrome or Toxic Shock Syndrome in a Patient on Avelumab for Ependymal Tumor. 2020.
  14. Khan M, Haq AU, McGhee M, Higuita NA. LEMIERRE'S SYNDROME: A FORGOTTEN DISEASE. Chest. 2020;158(4):A557.
  15. Chen J-T, Roberts R, Fazzari MJ, Kashani K, Qadir N, Cairns CB, et al. Variation in fluid and vasopressor use in shock with and without physiologic assessment: A multicenter observational study. Critical care medicine. 2020;48(10):1436-44.
  16. Garman L, Pelikan RC, Rasmussen A, Lareau CA, Savoy KA, Deshmukh US, et al. Single Cell Transcriptomics Implicate Novel Monocyte and T Cell Immune Dysregulation in Sarcoidosis. Front Immunol. 2020;11:567342-.
  17. Bernardo RJ, Haddad F, Couture EJ, Hansmann G, de Jesus Perez VA, Denault AY, et al. Mechanics of right ventricular dysfunction in pulmonary arterial hypertension and heart failure with preserved ejection fraction. Cardiovascular Diagnosis and Therapy. 2020;10(5):1580.
  18. Samuel S, Brown B, Mason N, Abdo T. Diffuse alveolar hemorrhage, a rare presentation of polymyositis. Respiratory medicine case reports. 2020;31:101261.
  19. Roberts RJ, Miano TA, Hammond DA, Patel GP, Chen J-T, Phillips KM, et al. Evaluation of vasopressor exposure and mortality in patients with septic shock. Critical care medicine. 2020;48(10):1445-53.
  20. Ramirez III RL, Thomas CA, Anderson RJ, Bernardo RJ, Al-Motarreb A, Al-Suwaidi J, et al. Drug- and toxin-induced pulmonary arterial hypertension: Current state of the literature. 2020. 2020;2019(3).

2019

  1. Khan T, Usman Y, Abdo T, Chaudry F, Keddissi JI, Youness HA. Diagnosis and management of peripheral lung nodule. Annals of translational medicine. 2019.
  2. Christian F, Thierman A, Shirley E, Allen K, Cross C, Jones K. Sustained Glycemic Control With Ivacaftor in Cystic Fibrosis-Related Diabetes. J Investig Med High Impact Case Rep. 2019;7:2324709619842898.
  3. Raad S, Smith C, Allen K. Nutrition Status and Chronic Obstructive Pulmonary Disease: Can We Move Beyond the Body Mass Index? Nutr Clin Pract. 2019;34(3):330-9.
  4. Kebbe J, Raad S. Family Presence During Pulmonary Procedures. Annals of the American Thoracic Society. 2019.6.
  5. Gupta A, Youness H, Dhillon SS, Harris K. The value of using radial endobronchial ultrasound to guide transbronchial lung cryobiopsy. Journal of thoracic disease. 2019;11(1):329.
  6. Jacobs B, Youness H, Kebbe J. Transbronchial Cryobiopsy Leading to Transient Pulmonary Cavitations. Journal of bronchology & interventional pulmonology. 2019.
  7. Keddissi JI, Youness HA, Jones KR, Kinasewitz GT. Fluid management in Acute Respiratory Distress Syndrome: A narrative review. Canadian Journal of Respiratory Therapy. 2019;55(1).12. 
  8. Javed I, Abdo T, R Jones K. Metastatic Pleural Effusion: An Unusual Presentation of Urothelial Bladder Carcinoma, 2019.
  9. Mahmood S, Hoffman L, Ali IA, Zhao YD, Chen A, Allen K. Smart Phone/Device Application to Improve Delivery of Enteral Nutrition in Adult Patients Admitted to the Medical Intensive Care Unit. Nutrition and Metabolic Insights. 2019;12:1178638818820299.
  10. Allen K, Hoffman L. Enteral Nutrition in the Mechanically Ventilated Patient. Nutrition in Clinical Practice. 2019.
  11. Abdo TF, Bhardwaj H, Ishaq MK, Keddissi JI, Youness HA. Pleural fluid glucose testing using a finger stick glucometer: a novel bedside test. Journal of thoracic disease. 2019;11(11):4904-4908.
  12. Beigel JH, Aga E, Elie-Turenne M-C, et al. Anti-influenza immune plasma for the treatment of patients with severe influenza A: a randomised, double-blind, phase 3 trial. The Lancet Respiratory Medicine. 2019;7(11):941-950.
  13. Christian F, Thierman A, Shirley E, Allen K, Cross C, Jones K. Sustained Glycemic Control With Ivacaftor in Cystic Fibrosis-Related Diabetes. J Investig Med High Impact Case Rep. 2019;7:2324709619842898.
  14. Gupta A, Youness H, Dhillon SS, Harris K. The value of using radial endobronchial ultrasound to guide transbronchial lung cryobiopsy. Journal of thoracic disease. 2019;11(1):329-334.
  15. Helton R, Kebbe J. Acute Hemothorax Following Bronchoscopic Cryobiopsy: A Novel Complication. Journal of bronchology & interventional pulmonology. 2019;26(4):e55-e58.
  16. Jacobs B, Youness H, Kebbe J. Transbronchial Cryobiopsy Leading to Transient Pulmonary Cavitations. Journal of bronchology & interventional pulmonology. 2019;26(3):219-221.
  17. Javed IN, Abdo T, Ahmad N, Jones KR. Metastatic Pleural Effusion: An Unusual Presentation of Urothelial Bladder Carcinoma. Cureus. 2019;11(5):e4619-e4619.
  18. Kebbe J, Raad S. Family Presence during Pulmonary Procedures. Annals of the American Thoracic Society. 2019;16(7):807-810.
  19. Keddissi JI, Youness HA, Jones KR, Kinasewitz GT. Fluid management in Acute Respiratory Distress Syndrome: A narrative review. Can J Respir Ther. 2019;55:1-8.
  20. Khan T, Usman Y, Abdo T, Chaudry F, Keddissi JI, Youness HA. Diagnosis and management of peripheral lung nodule. Annals of translational medicine. 2019;7(15):348.
  21. Farooqui SM, Zulfiqar H, Aziz M. Shwachman-diamond syndrome. 2019.
  22. Bernardo RJ, Bokan A, Ramjug S. Updates in pulmonary hypertension and other pulmonary vascular diseases. Breathe (Sheff). 2019;15(3):241-3.

2018

  1. Youness HA, Keddissi JI. Case Studies in Adult Intensive Care Medicine. Anesth Analg. 2018.
  2. Farooqui SM, Youness H. The Infection Returns: A Case of Pulmonary Sporotrichosis Relapse after Chemotherapy. Case Rep Med. 2018;2018:1384029.
  3. Abdo T, Bhardwaj H, Keddissi J, Youness H. Pleural Fluid Glucose Testing Using a Finger Stick Glucometer; a Novel Bedside Test with Potential for a Prompt Diagnosis and Decision.  B101 NEW DEVELOPMENTS IN PLEURAL DISEASE DIAGNOSIS AND TREATMENT: American Thoracic Society; 2018. p. A4222-A.
  4. Doshi V, Cross C, Muppavarapu K. Sodium Oxybate–Associated Confusion in the Older Adult. Am J Ther. 2018.
  5. Yarbrough ML, Warren DK, Allen K, Burkholder D, Daum R, Donskey C, et al. Multicenter Evaluation of the Xpert MRSA NxG Assay for Detection of Methicillin-Resistant Staphylococcus aureus in Nasal Swabs. J Clin Microbiol. 2018;56(1).
  6. More S, Yang X, Zhu Z, Bamunuarachchi G, Guo Y, Huang C, et al. Regulation of influenza virus replication by Wnt/beta-catenin signaling. PloS one. 2018;13(1):e0191010.
  7. Langer M, Girton AW, Popescu NI, Burgett T, Metcalf JP, Coggeshall KM. Neither Lys- and DAP-type peptidoglycans stimulate mouse or human innate immune cells via Toll-like receptor 2. PLoS One. 2018;13(2):e0193207.
  8. Booth JL, Duggan ES, Patel VI, Wu W, Burian DM, Hutchings DC, et al. Gene expression profiling of primary human type I alveolar epithelial cells exposed to Bacillus anthracis spores reveals induction of neutrophil and monocyte chemokines. Microb Pathog. 2018;121:9-21.
  9. Bernardo R, Farooqui S, Tsui J, Saksouk B, Awab A. 561: The Use Of Thromboelastography For Assessment Of Coagulopathy In Nontrauma Critically Ill Patients. Critical care medicine. 2018;46(1):265.
  10. Helton R AK. Acute Bilateral Retinal Arterial Occlusion of Unknown Origin during a Cystic Fibrosis Pulmonary Exacerbation. J Pulm Respir Med. 2018;8: 481.
  11. Raad S, Hanna N, Jalal S, Bendaly E, Zhang C, Nuguru S, et al. Endobronchial Ultrasound-Guided Transbronchial Needle Aspiration Use for Subclassification and Genotyping of Lung Non-Small-Cell Carcinoma. Southern medical journal. 2018;111(8):484-8.
  12. Carlson BW, Duke J, Jones KR, Carlson JR, Craft MA, Coleman-Jackson R, et al. Sleep-Disordered Breathing and Cerebral Oxygenation During Sleep in Adults With Mild Cognitive Impairment. Res Gerontol Nurs. 2018;11(6):283-92.
  13. Youness HA, Harris K, Awab A, Keddissi JI. Bronchoscopic advances in the management of aerodigestive fistulas. Journal of thoracic disease. 2018;10(9):5636.
  14. Youness HA, Keddissi JI. Case Studies in Adult Intensive Care Medicine. LWW; 2018.
  15. Patel VI, Metcalf JP. Airway Macrophage and Dendritic Cell Subsets in the Resting Human Lung. Crit Rev Immunol. 2018;38(4):303-31.
  16. Booth JL, Duggan ES, Patel VI, Wu W, Burian DM, Hutchings DC, et al. Gene expression profiling of primary human type I alveolar epithelial cells exposed to Bacillus anthracis spores reveals induction of neutrophil and monocyte chemokines. Microbial pathogenesis. 2018;121:9-21.
  17. Wu W, Wang X, Zhang W, Tian L, Booth JL, Duggan ES, et al. RIG-I Signaling via MAVS Is Dispensable for Survival in Lethal Influenza Infection In Vivo. Mediators Inflamm. 2018;2018:6808934.

2017

 

2016

  1. Khan MS, Przebinda AS, Claros-Sorto J, Porter A. Pseudomembranous Tracheobronchitis: A Rare Presentation of Pseudomonas aeruginosa Infection. J Bronchology Interv Pulmonol. 2016;23(4):319-22.
  2. Patel JJ, Kha V, Butler D, Kozeniecki M, Martindale R, Allen K. Organ-Specific Nutrition: One for the History Books or Still an Active Player? Current Surgery Reports. 2016;4(8):28.
  3. Chao A, Waitzberg D, de Jesus RP, Bueno AA, Kha V, Allen K, et al. Malnutrition and Nutritional Support in Alcoholic Liver Disease: a Review. Current gastroenterology reports. 2016;18(12):65.
  4. Doshi V, Shenoy S, Ganesh A, Lankala S, Henkle J. Near Fatal Asthma in an Inner City Population. Am J Ther. 2016;23(6):e1375-e80.
  5. Doshi V, Saksouk B. Severe Hypercalcemia as a Presenting Feature of Sarcoidosis in a Patient on Etanercept Therapy.  B40 SARCOIDOSIS: ILLUSTRATIVE CASES AND CLINICAL SERIES. p. A3374-A.
  6. Kebbe J, Mador MJ. Let Them In: Family Presence during Intensive Care Unit Procedures. Ann Am Thorac Soc. 2016;13(9):1663.
  7. Kebbe J, Mador MJ. Exophiala pisciphila: a novel cause of allergic bronchopulmonary mycosis. Journal of thoracic disease. 2016;8(7):E538-41.
  8. Kebbe J, Alraiyes AH, Dhillon SS, Harris K. Lung Abscess Causing Airway Obstruction Requiring Temporary Tracheobronchial Stenting. Journal of bronchology & interventional pulmonology. 2016;23(3):e26-8.
  9. Harris K, Kebbe J, Modi K, Alraiyes AH, Kumar A, Attwood K, et al. Aspirin use and the risk of bleeding complications after therapeutic bronchoscopy. Therapeutic advances in respiratory disease. 2016;10(4):318-23.
  10. Booth JL, Duggan ES, Patel VI, Langer M, Wu W, Braun A, et al. Bacillus anthracis spore movement does not require a carrier cell and is not affected by lethal toxin in human lung models. Microbes and infection. 2016;18(10):615-26.
  11. Abu-Abed Abdin A, Hamza M, Khan MS, Ahmed A. Euglycemic Diabetic Ketoacidosis in a Patient with Cocaine Intoxication. Case reports in critical care. 2016;2016:4275651.
  12. Khan MS, Shahbaz N, Zia HA, Hamza M, Iqbal H, Awab A. Pancreaticopericardial Fistula: A Case Report and Literature Review. Case reports in critical care. 2016;2016:7169341.
  13. Bhardwaj B, Revannasiddaiah S, Bhardwaj H, Balusu S, Shwaiki A. Molecular targeted therapy to improve radiotherapeutic outcomes for non-small cell lung carcinoma. Annals of translational medicine. 2016;4(3):50.
  14. Khawar MU, Hussein H, Youness H. Castleman’s Disease Presenting As A Mediastinal Mass: Mimicker Of Malignancy.  D110 UNUSUAL TUMORS OF THE CHEST: American Thoracic Society; 2016. p. A7758-A.
  15. Wu W, Zhang W, Booth JL, Hutchings DC, Wang X, White VL, et al. Human primary airway epithelial cells isolated from active smokers have epigenetically impaired antiviral responses. Respir Res. 2016;17(1):111.